TAB1
TGF-beta activated kinase 1 (MAP3K7) binding protein 1 | MAP3K7IP1

The protein encoded by this gene was identified as a regulator of the MAP kinase kinase kinase MAP3K7/TAK1, which is known to mediate various intracellular signaling pathways, such as those induced by TGF beta, interleukin 1, and WNT-1. This protein interacts and thus activates TAK1 kinase. It has been shown that the C-terminal portion of this protein is sufficient for binding and activation of TAK1, while a portion of the N-terminus acts as a dominant-negative inhibitor of TGF beta, suggesting that this protein may function as a mediator between TGF beta receptors and TAK1. This protein can also interact with and activate the mitogen-activated protein kinase 14 (MAPK14/p38alpha), and thus represents an alternative activation pathway, in addition to the MAPKK pathways, which contributes to the biological responses of MAPK14 to various stimuli. Alternatively spliced transcript variants encoding distinct isoforms have been reported. [provided by RefSeq, Jul 2008]

Member of: DE-5
Biological processes 23 terms
Expression (TPM)
TAB1 — as a Regulated Gene

TFs regulating TAB1 0 TFs

Transcription factors with Perturb-seq knockdown data for TAB1. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = TAB1 upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.

Data: Effect:
TF Mean coef Binding Outlier TF→Gene link

Elements linked to TAB1

Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of TAB1, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.

Accessibility Element Dist. to TSS Link type TFs
chr22:39,144,772–39,146,359 254.1 kb Distal (>10kb) Multiome 668
chr22:39,152,016–39,153,700 247.1 kb Distal (>10kb) Multiome 607
chr22:39,170,852–39,171,359 228.7 kb Distal (>10kb) Multiome 425
chr22:39,174,292–39,175,258 224.9 kb Distal (>10kb) Multiome 688
chr22:39,179,438–39,180,229 220.1 kb Distal (>10kb) Multiome 84
chr22:39,229,884–39,230,835 169.6 kb Distal (>10kb) Multiome 417
chr22:39,242,211–39,244,345 156.9 kb Distal (>10kb) Multiome 605
chr22:39,310,537–39,311,897 88.7 kb Distal (>10kb) Multiome 655
chr22:39,319,163–39,320,470 80.1 kb Distal (>10kb) Multiome 968
chr22:39,349,608–39,350,646 49.9 kb Distal (>10kb) Multiome 412
chr22:39,388,249–39,388,891 11.3 kb Distal (>10kb) Multiome 336
chr22:39,399,211–39,400,196 35 bp At TSS Multiome 896
chr22:39,501,766–39,502,757 102.5 kb Distal (>10kb) Multiome 736
chr22:39,519,211–39,521,337 120.4 kb Distal (>10kb) Multiome 1150
chr22:39,528,868–39,529,848 129.6 kb Distal (>10kb) Multiome 829
chr22:39,532,183–39,533,171 133.1 kb Distal (>10kb) Multiome 799
chr22:39,534,113–39,535,455 135.2 kb Distal (>10kb) Multiome 621
chr22:39,598,010–39,598,521 198.6 kb Distal (>10kb) Multiome 163
chr22:39,661,773–39,663,221 262.7 kb Distal (>10kb) Multiome 260
chr22:39,663,880–39,665,145 264.9 kb Distal (>10kb) Multiome 208

Genome Browser

Genomic view of the TAB1 locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.

chr22:39,134,772 – 39,675,145
Proximal 1 kb Distal 10 kb Multiome HiCAR ATAC-seq RNA-seq