RNLS
renalase, FAD dependent amine oxidase | FLJ11218, renalase, C10orf59
Expression (TPM)
RNLS — as a Regulated Gene

TFs regulating RNLS 0 TFs

Transcription factors with Perturb-seq knockdown data for RNLS. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = RNLS upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.

Data: Effect:
TF Mean coef Binding Outlier TF→Gene link

Elements linked to RNLS

Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of RNLS, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.

Accessibility Element Dist. to TSS Link type TFs
chr10:87,861,521–87,864,430 719.8 kb Distal (>10kb) Multiome HiCAR 1208
chr10:88,371,648–88,372,566 211.1 kb Distal (>10kb) Multiome 115
chr10:88,375,677–88,376,274 207.2 kb Distal (>10kb) Multiome 61
chr10:88,582,470–88,583,714 168 bp At TSS Multiome 465
chr10:88,702,897–88,703,854 120.1 kb Distal (>10kb) Multiome 410
chr10:88,728,234–88,729,081 145.3 kb Distal (>10kb) Multiome 223
chr10:88,879,874–88,881,155 297.3 kb Distal (>10kb) Multiome 837

Genome Browser

Genomic view of the RNLS locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.

chr10:87,851,521 – 88,891,155
Proximal 1 kb Distal 10 kb Multiome HiCAR ATAC-seq RNA-seq