Predicted to be located in cytoplasm and membrane. [provided by Alliance of Genome Resources, Jul 2025]
Transcription factors with Perturb-seq knockdown data for RNF32-DT. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = RNF32-DT upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.
| TF | Mean coef | Binding | Outlier | TF→Gene link |
|---|
Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of RNF32-DT, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.
| Accessibility | Element | Dist. to TSS | Link type | TFs |
|---|---|---|---|---|
| chr7:155,796,797–155,797,641 | 843.4 kb | Distal (>10kb) Multiome HiCAR | 291 | |
| chr7:155,802,850–155,806,571 | 836.7 kb | Distal (>10kb) Multiome HiCAR | 556 | |
| chr7:156,585,099–156,585,610 | 55.2 kb | Distal (>10kb) Multiome | 125 | |
| chr7:156,616,217–156,617,178 | 23.8 kb | Distal (>10kb) Multiome | 381 | |
| chr7:156,639,673–156,641,488 | 152 bp | At TSS Multiome | 784 | |
| chr7:156,892,088–156,893,883 | 252.8 kb | Distal (>10kb) Multiome | 1026 |
Genomic view of the RNF32-DT locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.