NOTUM
notum, palmitoleoyl-protein carboxylesterase
NOTUM — as a Regulated Gene

TFs regulating NOTUM 0 TFs

Transcription factors with Perturb-seq knockdown data for NOTUM. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = NOTUM upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.

Data: Effect:
TF Mean coef Binding Outlier TF→Gene link

Elements linked to NOTUM

Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of NOTUM, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.

Accessibility Element Dist. to TSS Link type TFs
chr17:81,666,251–81,667,166 294.5 kb Distal (>10kb) Multiome 901
chr17:81,683,344–81,684,556 277.3 kb Distal (>10kb) Multiome 926
chr17:81,702,879–81,703,868 257.8 kb Distal (>10kb) Multiome 981
chr17:81,711,721–81,712,812 249.0 kb Distal (>10kb) Multiome 1056
chr17:81,832,473–81,833,976 127.9 kb Distal (>10kb) Multiome 1015
chr17:81,859,762–81,861,595 100.3 kb Distal (>10kb) Multiome 1134
chr17:81,868,421–81,868,978 92.6 kb Distal (>10kb) Multiome 577
chr17:81,869,000–81,872,289 89.9 kb Distal (>10kb) Multiome 1136
chr17:81,891,143–81,892,257 69.4 kb Distal (>10kb) Multiome 969
chr17:81,910,443–81,911,980 49.6 kb Distal (>10kb) Multiome 806
chr17:81,917,586–81,918,522 43.0 kb Distal (>10kb) Multiome 619
chr17:81,923,285–81,923,863 37.7 kb Distal (>10kb) Multiome 399
chr17:81,926,141–81,929,133 33.3 kb Distal (>10kb) Multiome 1034
chr17:81,936,855–81,937,682 23.8 kb Distal (>10kb) Multiome 854
chr17:81,959,299–81,962,169 1.4 kb Proximal (<10kb) Multiome 805
chr17:81,966,804–81,968,359 6.9 kb Proximal (<10kb) Multiome 908
chr17:81,976,595–81,978,312 16.5 kb Distal (>10kb) Multiome 1001
chr17:82,019,856–82,020,391 58.9 kb Distal (>10kb) Multiome 436
chr17:82,022,355–82,024,111 61.9 kb Distal (>10kb) Multiome 898
chr17:82,029,976–82,032,662 70.7 kb Distal (>10kb) Multiome 695
chr17:82,036,902–82,037,961 76.4 kb Distal (>10kb) Multiome 892
chr17:82,051,387–82,052,184 90.6 kb Distal (>10kb) Multiome 479
chr17:82,065,558–82,066,150 104.6 kb Distal (>10kb) Multiome 967
chr17:82,096,478–82,100,203 137.4 kb Distal (>10kb) Multiome 1085
chr17:82,103,334–82,104,356 142.4 kb Distal (>10kb) Multiome 672
chr17:82,212,405–82,213,592 251.7 kb Distal (>10kb) Multiome 911
chr17:82,228,266–82,232,536 267.8 kb Distal (>10kb) Multiome 1048

Genome Browser

Genomic view of the NOTUM locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.

chr17:81,656,251 – 82,242,536
Proximal 1 kb Distal 10 kb Multiome HiCAR ATAC-seq RNA-seq