NDUFB7
NADH:ubiquinone oxidoreductase subunit B7 | B18, CI-B18, MGC2480
Expression (TPM)
NDUFB7 — as a Regulated Gene

TFs regulating NDUFB7 0 TFs

Transcription factors with Perturb-seq knockdown data for NDUFB7. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = NDUFB7 upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.

Data: Effect:
TF Mean coef Binding Outlier TF→Gene link

Elements linked to NDUFB7

Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of NDUFB7, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.

Accessibility Element Dist. to TSS Link type TFs
chr19:14,294,831–14,295,420 276.9 kb Distal (>10kb) Multiome 60
chr19:14,363,590–14,364,020 208.4 kb Distal (>10kb) Multiome 402
chr19:14,405,442–14,406,893 165.9 kb Distal (>10kb) Multiome 662
chr19:14,418,847–14,419,795 152.6 kb Distal (>10kb) Multiome 817
chr19:14,432,848–14,433,780 138.7 kb Distal (>10kb) Multiome 524
chr19:14,450,232–14,451,000 121.4 kb Distal (>10kb) Multiome 271
chr19:14,472,177–14,472,986 99.5 kb Distal (>10kb) Multiome 566
chr19:14,495,705–14,496,690 75.8 kb Distal (>10kb) Multiome 813
chr19:14,517,523–14,519,160 53.5 kb Distal (>10kb) Multiome 952
chr19:14,528,857–14,530,279 42.6 kb Distal (>10kb) Multiome 842
chr19:14,536,700–14,537,683 34.9 kb Distal (>10kb) Multiome 329
chr19:14,556,545–14,557,088 15.2 kb Distal (>10kb) Multiome 509
chr19:14,564,060–14,565,155 7.5 kb Proximal (<10kb) Multiome 226
chr19:14,568,290–14,568,652 3.4 kb Proximal (<10kb) 22
chr19:14,571,772–14,572,330 37 bp At TSS Multiome 896
chr19:14,574,225–14,574,521 2.2 kb Proximal (<10kb) 466
chr19:14,689,407–14,690,497 117.9 kb Distal (>10kb) Multiome HiCAR 624
chr19:15,073,077–15,073,718 501.3 kb Distal (>10kb) Multiome HiCAR 204
chr19:15,106,942–15,107,576 535.2 kb Distal (>10kb) Multiome HiCAR 339
chr19:16,075,837–16,077,586 1504.3 kb Distal (>10kb) Multiome HiCAR 735

Genome Browser

Genomic view of the NDUFB7 locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.

chr19:14,284,831 – 16,087,586
Proximal 1 kb Distal 10 kb Multiome HiCAR ATAC-seq RNA-seq