Enables protein-L-histidine N-pros-methyltransferase activity. Predicted to be involved in methylation. Is active in endoplasmic reticulum and mitochondrion. [provided by Alliance of Genome Resources, Jul 2025]
Transcription factors with Perturb-seq knockdown data for METTL9. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = METTL9 upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.
| TF | Mean coef | Binding | Outlier | TF→Gene link |
|---|
Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of METTL9, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.
| Accessibility | Element | Dist. to TSS | Link type | TFs |
|---|---|---|---|---|
| chr16:21,300,604–21,301,993 | 298.8 kb | Distal (>10kb) Multiome | 1062 | |
| chr16:21,302,514–21,303,208 | 296.7 kb | Distal (>10kb) Multiome | 136 | |
| chr16:21,501,368–21,502,964 | 97.2 kb | Distal (>10kb) Multiome | 766 | |
| chr16:21,519,749–21,521,002 | 79.1 kb | Distal (>10kb) Multiome | 859 | |
| chr16:21,521,389–21,522,043 | 77.8 kb | Distal (>10kb) Multiome | 479 | |
| chr16:21,598,942–21,600,295 | 1 bp | At TSS Multiome | 1085 |
Genomic view of the METTL9 locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.