Transcription factors with Perturb-seq knockdown data for ENSG00000293570. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = ENSG00000293570 upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.
| TF | Mean coef | Binding | Outlier | TF→Gene link |
|---|
Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of ENSG00000293570, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.
| Accessibility | Element | Dist. to TSS | Link type | TFs |
|---|---|---|---|---|
| chr19:20,361,845–20,362,321 | 304 bp | At TSS | 8 | |
| chr19:20,367,718–20,368,350 | 5.1 kb | Proximal (<10kb) | 103 | |
| chr19:20,371,363–20,371,766 | 8.7 kb | Proximal (<10kb) | 10 | |
| chr19:20,371,834–20,372,343 | 9.2 kb | Proximal (<10kb) | 96 |
Genomic view of the ENSG00000293570 locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.