Transcription factors with Perturb-seq knockdown data for ENSG00000290833. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = ENSG00000290833 upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.
| TF | Mean coef | Binding | Outlier | TF→Gene link |
|---|
Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of ENSG00000290833, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.
| Accessibility | Element | Dist. to TSS | Link type | TFs |
|---|---|---|---|---|
| chr7:74,656,570–74,659,496 | 232.0 kb | Distal (>10kb) Multiome | 997 | |
| chr7:74,890,333–74,890,583 | at TSS | At TSS | 80 | |
| chr7:74,890,719–74,891,006 | 162 bp | At TSS | 172 | |
| chr7:75,073,093–75,074,178 | 183.2 kb | Distal (>10kb) Multiome | 785 | |
| chr7:75,156,930–75,157,393 | 266.4 kb | Distal (>10kb) Multiome | 57 |
Genomic view of the ENSG00000290833 locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.