ENSG00000271860
MIR2113 host gene | uc.196, uc.197, uc.198, uc.199
Member of: DE-12 DE-12.4
Expression (TPM)
ENSG00000271860 — as a Regulated Gene

TFs regulating ENSG00000271860 0 TFs

Transcription factors with Perturb-seq knockdown data for ENSG00000271860. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = ENSG00000271860 upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.

Data: Effect:
TF Mean coef Binding Outlier TF→Gene link

Elements linked to ENSG00000271860

Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of ENSG00000271860, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.

Accessibility Element Dist. to TSS Link type TFs
chr6:97,778,220–97,780,020 37.7 kb Distal (>10kb) Multiome 269
chr6:98,039,479–98,040,652 223.4 kb Distal (>10kb) Multiome 233

Genome Browser

Genomic view of the ENSG00000271860 locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.

chr6:97,768,220 – 98,050,652
Proximal 1 kb Distal 10 kb Multiome HiCAR ATAC-seq RNA-seq