Transcription factors with Perturb-seq knockdown data for ENSG00000262801. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = ENSG00000262801 upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.
| TF | Mean coef | Binding | Outlier | TF→Gene link |
|---|
Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of ENSG00000262801, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.
| Accessibility | Element | Dist. to TSS | Link type | TFs |
|---|---|---|---|---|
| chr16:13,070,291–13,070,801 | 175.7 kb | Distal (>10kb) Multiome | 60 | |
| chr16:13,232,494–13,233,014 | 13.4 kb | Distal (>10kb) Multiome | 11 | |
| chr16:13,285,618–13,286,323 | 39.6 kb | Distal (>10kb) Multiome | 12 | |
| chr16:13,324,720–13,325,207 | 78.9 kb | Distal (>10kb) Multiome | 18 |
Genomic view of the ENSG00000262801 locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.