EMC10
ER membrane protein complex subunit 10 | HSM1, HSS1, INM02, C19orf63
EMC10 — as a Regulated Gene

TFs regulating EMC10 0 TFs

Transcription factors with Perturb-seq knockdown data for EMC10. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = EMC10 upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.

Data: Effect:
TF Mean coef Binding Outlier TF→Gene link

Elements linked to EMC10

Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of EMC10, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.

Accessibility Element Dist. to TSS Link type TFs
chr19:50,203,034–50,204,072 273.0 kb Distal (>10kb) Multiome 363
chr19:50,205,195–50,205,903 271.1 kb Distal (>10kb) Multiome 364
chr19:50,311,942–50,312,908 164.2 kb Distal (>10kb) Multiome 364
chr19:50,313,900–50,314,529 162.3 kb Distal (>10kb) Multiome 114
chr19:50,315,313–50,316,408 160.5 kb Distal (>10kb) Multiome 363
chr19:50,325,322–50,326,594 150.7 kb Distal (>10kb) Multiome 748
chr19:50,328,019–50,330,066 147.2 kb Distal (>10kb) Multiome 699
chr19:50,330,341–50,331,411 145.6 kb Distal (>10kb) Multiome 479
chr19:50,332,395–50,334,325 142.9 kb Distal (>10kb) Multiome 907
chr19:50,368,630–50,369,092 107.6 kb Distal (>10kb) Multiome HiCAR 311
chr19:50,376,225–50,377,452 99.9 kb Distal (>10kb) Multiome 931
chr19:50,383,444–50,384,805 92.3 kb Distal (>10kb) Multiome 863
chr19:50,414,638–50,415,204 61.6 kb Distal (>10kb) Multiome 377
chr19:50,431,430–50,432,503 44.7 kb Distal (>10kb) Multiome 530
chr19:50,475,914–50,477,044 58 bp At TSS Multiome 622
chr19:50,510,707–50,511,948 34.9 kb Distal (>10kb) Multiome 794
chr19:50,556,266–50,557,084 80.2 kb Distal (>10kb) Multiome 463
chr19:50,639,246–50,640,210 163.2 kb Distal (>10kb) Multiome 326
chr19:50,657,814–50,659,557 181.8 kb Distal (>10kb) Multiome 790
chr19:50,723,765–50,725,772 248.4 kb Distal (>10kb) Multiome 721
chr19:50,728,202–50,728,738 252.0 kb Distal (>10kb) Multiome 345

Genome Browser

Genomic view of the EMC10 locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.

chr19:50,193,034 – 50,738,738
Proximal 1 kb Distal 10 kb Multiome HiCAR ATAC-seq RNA-seq