DYNC1I1
dynein cytoplasmic 1 intermediate chain 1 | DNCIC1, DNCI1
DYNC1I1 — as a Regulated Gene

TFs regulating DYNC1I1 0 TFs

Transcription factors with Perturb-seq knockdown data for DYNC1I1. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = DYNC1I1 upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.

Data: Effect:
TF Mean coef Binding Outlier TF→Gene link

Elements linked to DYNC1I1

Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of DYNC1I1, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.

Accessibility Element Dist. to TSS Link type TFs
chr7:95,549,589–95,550,472 222.6 kb Distal (>10kb) Multiome 407
chr7:95,595,916–95,597,166 176.0 kb Distal (>10kb) Multiome 538
chr7:95,772,187–95,773,636 14 bp At TSS Multiome 600
chr7:95,840,747–95,842,872 69.3 kb Distal (>10kb) Multiome 273
chr7:96,017,820–96,018,353 245.4 kb Distal (>10kb) Multiome 229
chr7:97,016,407–97,017,582 1244.2 kb Distal (>10kb) Multiome HiCAR 599
chr7:97,023,662–97,025,361 1252.0 kb Distal (>10kb) Multiome HiCAR 445
chr7:97,731,618–97,734,138 1961.0 kb Distal (>10kb) Multiome HiCAR 383

Genome Browser

Genomic view of the DYNC1I1 locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.

chr7:95,539,589 – 97,744,138
Proximal 1 kb Distal 10 kb Multiome HiCAR ATAC-seq RNA-seq