DLAT
dihydrolipoamide S-acetyltransferase | E2, PDC-E2, DLTA

This gene encodes component E2 of the multi-enzyme pyruvate dehydrogenase complex (PDC). PDC resides in the inner mitochondrial membrane and catalyzes the conversion of pyruvate to acetyl coenzyme A. The protein product of this gene, dihydrolipoamide acetyltransferase, accepts acetyl groups formed by the oxidative decarboxylation of pyruvate and transfers them to coenzyme A. Dihydrolipoamide acetyltransferase is the antigen for antimitochondrial antibodies. These autoantibodies are present in nearly 95% of patients with the autoimmune liver disease primary biliary cirrhosis (PBC). In PBC, activated T lymphocytes attack and destroy epithelial cells in the bile duct where this protein is abnormally distributed and overexpressed. PBC enventually leads to cirrhosis and liver failure. Mutations in this gene are also a cause of pyruvate dehydrogenase E2 deficiency which causes primary lactic acidosis in infancy and early childhood.[provided by RefSeq, Oct 2009]

Member of: DE-7 Developmental clusters: GC4
Biological processes 28 terms
Expression (TPM)
DLAT — as a Regulated Gene

TFs regulating DLAT 0 TFs

Transcription factors with Perturb-seq knockdown data for DLAT. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = DLAT upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.

Data: Effect:
TF Mean coef Binding Outlier TF→Gene link

Elements linked to DLAT

Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of DLAT, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.

Accessibility Element Dist. to TSS Link type TFs
chr11:111,765,276–111,766,937 259.0 kb Distal (>10kb) Multiome 726
chr11:111,784,858–111,785,661 240.1 kb Distal (>10kb) Multiome 164
chr11:111,870,839–111,871,692 154.1 kb Distal (>10kb) Multiome 781
chr11:111,878,459–111,879,798 146.2 kb Distal (>10kb) Multiome 970
chr11:111,918,534–111,919,259 106.5 kb Distal (>10kb) Multiome 468
chr11:111,926,372–111,927,689 98.3 kb Distal (>10kb) Multiome 767
chr11:111,936,752–111,938,016 88.1 kb Distal (>10kb) Multiome 671
chr11:111,960,703–111,961,374 64.4 kb Distal (>10kb) Multiome 192
chr11:111,976,357–111,978,029 48.2 kb Distal (>10kb) Multiome 293
chr11:111,982,641–111,983,482 42.1 kb Distal (>10kb) Multiome 290
chr11:112,024,495–112,025,893 251 bp At TSS Multiome 1024
chr11:112,073,749–112,074,754 48.8 kb Distal (>10kb) Multiome 828
chr11:112,086,268–112,087,320 61.4 kb Distal (>10kb) Multiome 883
chr11:112,225,928–112,226,959 201.1 kb Distal (>10kb) Multiome 809
chr11:112,289,677–112,290,832 264.8 kb Distal (>10kb) Multiome 568

Genome Browser

Genomic view of the DLAT locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.

chr11:111,755,276 – 112,300,832
Proximal 1 kb Distal 10 kb Multiome HiCAR ATAC-seq RNA-seq