DEPTOR
DEP domain containing MTOR interacting protein | DEP.6, FLJ12428, DEPDC6

Enables phosphatidic acid binding activity and protein serine/threonine kinase inhibitor activity. Involved in several processes, including negative regulation of TOR signaling; negative regulation of cell size; and negative regulation of protein kinase activity. Is active in lysosomal membrane. [provided by Alliance of Genome Resources, Jul 2025]

Developmental clusters: GC5
Biological processes 24 terms
Expression (TPM)
DEPTOR — as a Regulated Gene

TFs regulating DEPTOR 0 TFs

Transcription factors with Perturb-seq knockdown data for DEPTOR. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = DEPTOR upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.

Data: Effect:
TF Mean coef Binding Outlier TF→Gene link

Elements linked to DEPTOR

Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of DEPTOR, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.

Accessibility Element Dist. to TSS Link type TFs
chr8:119,638,540–119,639,410 234.8 kb Distal (>10kb) Multiome 275
chr8:119,672,030–119,673,835 200.4 kb Distal (>10kb) Multiome 397
chr8:119,832,338–119,833,429 40.9 kb Distal (>10kb) Multiome 811
chr8:119,855,284–119,857,254 17.8 kb Distal (>10kb) Multiome 941
chr8:119,866,843–119,867,433 6.3 kb Proximal (<10kb) 302
chr8:119,873,210–119,874,965 7 bp At TSS Multiome 871
chr8:120,047,941–120,048,921 174.6 kb Distal (>10kb) Multiome 198
chr8:120,123,318–120,126,661 250.0 kb Distal (>10kb) Multiome 769

Genome Browser

Genomic view of the DEPTOR locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.

chr8:119,628,540 – 120,136,661
Proximal 1 kb Distal 10 kb Multiome HiCAR ATAC-seq RNA-seq