DDIT4
DNA damage inducible transcript 4 | Dig2, FLJ20500, REDD-1, REDD1, RTP801
DDIT4 — as a Regulated Gene

TFs regulating DDIT4 0 TFs

Transcription factors with Perturb-seq knockdown data for DDIT4. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = DDIT4 upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.

Data: Effect:
TF Mean coef Binding Outlier TF→Gene link

Elements linked to DDIT4

Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of DDIT4, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.

Accessibility Element Dist. to TSS Link type TFs
chr10:72,048,540–72,049,027 225.2 kb Distal (>10kb) Multiome 552
chr10:72,215,518–72,216,511 57.8 kb Distal (>10kb) Multiome 971
chr10:72,244,755–72,245,425 28.8 kb Distal (>10kb) Multiome 394
chr10:72,254,948–72,255,560 18.7 kb Distal (>10kb) Multiome 585
chr10:72,259,944–72,262,216 12.9 kb Distal (>10kb) Multiome 1074
chr10:72,272,463–72,275,209 143 bp At TSS Multiome 1276
chr10:72,277,006–72,277,880 3.1 kb Proximal (<10kb) 551
chr10:72,297,342–72,298,653 24.2 kb Distal (>10kb) Multiome 804
chr10:72,319,311–72,320,392 45.9 kb Distal (>10kb) Multiome 894
chr10:72,328,158–72,328,974 54.5 kb Distal (>10kb) Multiome 491
chr10:72,331,701–72,332,670 58.2 kb Distal (>10kb) Multiome 707
chr10:72,353,679–72,355,474 81.0 kb Distal (>10kb) Multiome 1081
chr10:72,364,187–72,364,837 90.5 kb Distal (>10kb) Multiome 539
chr10:72,365,363–72,366,008 91.8 kb Distal (>10kb) Multiome 20
chr10:72,456,009–72,456,568 182.4 kb Distal (>10kb) Multiome 83

Genome Browser

Genomic view of the DDIT4 locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.

chr10:72,038,540 – 72,466,568
Proximal 1 kb Distal 10 kb Multiome HiCAR ATAC-seq RNA-seq