B3GNT7

UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 | beta3GnT7

Enables acetylglucosaminyltransferase activity. Involved in keratan sulfate proteoglycan biosynthetic process. Predicted to be located in Golgi apparatus and membrane. Predicted to be active in Golgi membrane. [provided by Alliance of Genome Resources, Jul 2025]

Developmental clusters: GC3

Biological processes 15 terms

Golgi membrane (GO:0000139)Golgi membrane (GO:0000139)Golgi membrane (GO:0000139)N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase activity (GO:0008532)N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase activity (GO:0008532)UDP-glycosyltransferase activity (GO:0008194)acetylglucosaminyltransferase activity (GO:0008375)glycoprotein biosynthetic process (GO:0009101)hexosyltransferase activity (GO:0016758)keratan sulfate proteoglycan biosynthetic process (GO:0018146)keratan sulfate proteoglycan biosynthetic process (GO:0018146)keratan sulfate proteoglycan biosynthetic process (GO:0018146)keratan sulfate proteoglycan biosynthetic process (GO:0018146)membrane (GO:0016020)protein binding (GO:0005515)

Expression (TPM)

TFs regulating B3GNT7 0 TFs

Transcription factors with Perturb-seq knockdown data for B3GNT7. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = B3GNT7 upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.

TF	Mean coef	Binding	Outlier	TF→Gene link

Rows:

Elements linked to B3GNT7

Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of B3GNT7, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.

Element	Dist. to TSS	Link type	TFs
chr2:231,189,962–231,191,188	205.0 kb	Distal (>10kb) Multiome	358
chr2:231,198,151–231,199,150	197.0 kb	Distal (>10kb) Multiome	760
chr2:231,297,093–231,297,547	98.4 kb	Distal (>10kb) Multiome HiCAR	344
chr2:231,337,851–231,338,311	57.6 kb	Distal (>10kb) Multiome	58
chr2:231,370,064–231,371,397	24.8 kb	Distal (>10kb) Multiome	214
chr2:231,375,406–231,377,370	19.2 kb	Distal (>10kb) Multiome	232
chr2:231,393,165–231,393,378	2.3 kb	Proximal (<10kb)	89
chr2:231,394,766–231,396,655	19 bp	At TSS Multiome	339
chr2:231,410,617–231,411,062	15.1 kb	Distal (>10kb) Multiome	150
chr2:231,411,845–231,413,014	16.7 kb	Distal (>10kb) Multiome	691
chr2:231,463,695–231,465,687	68.9 kb	Distal (>10kb) Multiome	1126
chr2:231,482,645–231,483,215	87.3 kb	Distal (>10kb) Multiome	450
chr2:231,483,468–231,484,163	88.2 kb	Distal (>10kb) Multiome	197
chr2:231,514,074–231,514,984	118.8 kb	Distal (>10kb) Multiome	731
chr2:231,530,197–231,530,963	134.8 kb	Distal (>10kb) Multiome	395
chr2:231,557,621–231,558,377	162.4 kb	Distal (>10kb) Multiome	215
chr2:231,601,487–231,602,111	206.1 kb	Distal (>10kb) Multiome	239
chr2:231,604,056–231,605,408	209.1 kb	Distal (>10kb) Multiome	677
chr2:231,611,822–231,613,019	217.0 kb	Distal (>10kb) Multiome	673
chr2:231,613,128–231,615,041	218.5 kb	Distal (>10kb) Multiome	956
chr2:231,621,037–231,621,485	225.8 kb	Distal (>10kb) Multiome	189
chr2:231,661,829–231,663,079	266.7 kb	Distal (>10kb) Multiome	645
chr2:231,666,093–231,667,175	270.9 kb	Distal (>10kb) Multiome	778
chr2:231,672,732–231,673,910	277.7 kb	Distal (>10kb) Multiome	570
chr2:231,674,697–231,675,325	279.4 kb	Distal (>10kb) Multiome	455
chr2:231,679,801–231,681,869	285.5 kb	Distal (>10kb) Multiome	959
chr2:231,687,250–231,687,863	291.8 kb	Distal (>10kb) Multiome	640

Genome Browser

Genomic view of the B3GNT7 locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.