Transcription factors with Perturb-seq knockdown data for ANXA2R-OT1. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = ANXA2R-OT1 upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.
| TF | Mean coef | Binding | Outlier | TF→Gene link |
|---|
Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of ANXA2R-OT1, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.
| Accessibility | Element | Dist. to TSS | Link type | TFs |
|---|---|---|---|---|
| chr5:42,756,638–42,757,621 | 261.1 kb | Distal (>10kb) Multiome | 314 | |
| chr5:42,811,575–42,812,593 | 205.9 kb | Distal (>10kb) Multiome | 702 | |
| chr5:42,813,381–42,813,999 | 204.2 kb | Distal (>10kb) Multiome | 122 | |
| chr5:42,893,601–42,894,516 | 124.0 kb | Distal (>10kb) Multiome | 155 | |
| chr5:42,908,461–42,909,511 | 109.0 kb | Distal (>10kb) Multiome | 451 | |
| chr5:43,007,445–43,008,850 | 9.1 kb | Proximal (<10kb) | 862 | |
| chr5:43,010,087–43,010,939 | 7.0 kb | Proximal (<10kb) | 417 | |
| chr5:43,016,201–43,016,848 | 1.6 kb | Proximal (<10kb) Multiome | 194 | |
| chr5:43,017,299–43,018,875 | 41 bp | At TSS Multiome | 870 | |
| chr5:43,018,997–43,019,167 | 1.0 kb | Proximal (<10kb) | 178 | |
| chr5:43,019,534–43,019,881 | 1.6 kb | Proximal (<10kb) | 325 | |
| chr5:43,020,015–43,020,316 | 2.0 kb | Proximal (<10kb) | 507 | |
| chr5:43,020,419–43,020,757 | 2.4 kb | Proximal (<10kb) | 302 | |
| chr5:43,024,186–43,024,558 | 6.2 kb | Proximal (<10kb) | 23 | |
| chr5:43,024,983–43,026,034 | 7.5 kb | Proximal (<10kb) Multiome | 130 | |
| chr5:43,026,256–43,026,606 | 8.3 kb | Proximal (<10kb) | 31 | |
| chr5:43,041,652–43,043,529 | 24.2 kb | Distal (>10kb) Multiome | 897 | |
| chr5:43,063,696–43,064,191 | 3.2 kb | Proximal (<10kb) | 231 | |
| chr5:43,064,252–43,065,217 | 47.0 kb | Distal (>10kb) Multiome | 959 | |
| chr5:43,065,406–43,065,552 | 1.8 kb | Proximal (<10kb) | 136 | |
| chr5:43,065,881–43,067,664 | 48.6 kb | Distal (>10kb) Multiome | 928 | |
| chr5:43,073,946–43,074,322 | 6.6 kb | Proximal (<10kb) | 247 | |
| chr5:43,105,415–43,106,204 | 87.9 kb | Distal (>10kb) Multiome | 820 | |
| chr5:43,120,453–43,122,435 | 103.4 kb | Distal (>10kb) Multiome | 1097 | |
| chr5:43,191,656–43,192,908 | 174.2 kb | Distal (>10kb) Multiome | 475 | |
| chr5:43,312,549–43,314,340 | 295.6 kb | Distal (>10kb) Multiome | 954 | |
| chr5:43,348,196–43,348,656 | 330.4 kb | Distal (>10kb) Multiome | 141 | |
| chr5:43,396,804–43,397,322 | 379.1 kb | Distal (>10kb) Multiome HiCAR | 340 |
Genomic view of the ANXA2R-OT1 locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.