ANXA11
annexin A11 | ANX11

This gene encodes a member of the annexin family, a group of calcium-dependent phospholipid-binding proteins. Annexins have unique N-terminal domains and conserved C-terminal domains, which contain calcium-dependent phospholipid-binding sites. The encoded protein is a 56-kD antigen recognized by sera from patients with various autoimmune diseases. Several transcript variants encoding two different isoforms have been identified. [provided by RefSeq, Dec 2015]

Member of: DE-1 Developmental clusters: GC2
Biological processes 38 terms
Expression (TPM)
ANXA11 — as a Regulated Gene

TFs regulating ANXA11 0 TFs

Transcription factors with Perturb-seq knockdown data for ANXA11. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = ANXA11 upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.

Data: Effect:
TF Mean coef Binding Outlier TF→Gene link

Elements linked to ANXA11

Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of ANXA11, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.

Accessibility Element Dist. to TSS Link type TFs
chr10:79,444,238–79,447,010 759.7 kb Distal (>10kb) Multiome HiCAR 851
chr10:79,981,449–79,982,593 223.5 kb Distal (>10kb) Multiome 420
chr10:80,076,334–80,077,082 129.0 kb Distal (>10kb) Multiome 10
chr10:80,078,334–80,079,521 126.6 kb Distal (>10kb) Multiome 806
chr10:80,132,279–80,133,011 72.9 kb Distal (>10kb) Multiome 155
chr10:80,203,507–80,203,886 1.6 kb Proximal (<10kb) 477
chr10:80,204,160–80,204,638 898 bp At TSS 198
chr10:80,204,736–80,206,157 38 bp At TSS Multiome 830
chr10:80,207,076–80,207,999 2.0 kb Proximal (<10kb) Multiome 466
chr10:80,265,707–80,266,498 60.5 kb Distal (>10kb) Multiome 166
chr10:80,356,265–80,357,947 151.4 kb Distal (>10kb) Multiome 316
chr10:80,407,698–80,409,441 203.0 kb Distal (>10kb) Multiome 766
chr10:80,453,293–80,455,470 248.6 kb Distal (>10kb) Multiome 715
chr10:80,460,762–80,461,239 255.4 kb Distal (>10kb) Multiome 249
chr10:80,464,428–80,465,474 259.3 kb Distal (>10kb) Multiome 372

Genome Browser

Genomic view of the ANXA11 locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.

chr10:79,434,238 – 80,475,474
Proximal 1 kb Distal 10 kb Multiome HiCAR ATAC-seq RNA-seq