ADGRL3
adhesion G protein-coupled receptor L3 | KIAA0768, LEC3, LPHN3

This gene encodes a member of the latrophilin subfamily of G-protein coupled receptors (GPCR). Latrophilins may function in both cell adhesion and signal transduction. In experiments with non-human species, endogenous proteolytic cleavage within a cysteine-rich GPS (G-protein-coupled-receptor proteolysis site) domain resulted in two subunits (a large extracellular N-terminal cell adhesion subunit and a subunit with substantial similarity to the secretin/calcitonin family of GPCRs) being non-covalently bound at the cell membrane. [provided by RefSeq, Jul 2008]

Member of: DE-3 DE-3.7 Developmental clusters: GC3
Biological processes 42 terms
G protein-coupled receptor activity (GO:0004930)G protein-coupled receptor activity (GO:0004930)G protein-coupled receptor activity (GO:0004930)G protein-coupled receptor activity (GO:0004930)G protein-coupled receptor activity (GO:0004930)G protein-coupled receptor activity (GO:0004930)G protein-coupled receptor signaling pathway (GO:0007186)G protein-coupled receptor signaling pathway (GO:0007186)G protein-coupled receptor signaling pathway (GO:0007186)G protein-coupled receptor signaling pathway (GO:0007186)Rho-activating G protein-coupled receptor signaling pathway (GO:0160221)Rho-activating G protein-coupled receptor signaling pathway (GO:0160221)adenylate cyclase-activating G protein-coupled receptor signaling pathway (GO:0007189)anchoring junction (GO:0070161)axon (GO:0030424)axon (GO:0030424)axon (GO:0030424)calcium ion binding (GO:0005509)calcium ion binding (GO:0005509)carbohydrate binding (GO:0030246)cell adhesion (GO:0007155)cell adhesion mediator activity (GO:0098631)cell surface receptor signaling pathway (GO:0007166)cell-cell adhesion (GO:0098609)cell-cell adhesion (GO:0098609)cell-cell junction (GO:0005911)cell-cell junction (GO:0005911)excitatory synapse assembly (GO:1904861)glutamatergic synapse (GO:0098978)membrane (GO:0016020)membrane (GO:0016020)membrane (GO:0016020)molecular condensate scaffold activity (GO:0140693)neuron migration (GO:0001764)plasma membrane (GO:0005886)plasma membrane (GO:0005886)plasma membrane (GO:0005886)postsynaptic membrane (GO:0045211)protein binding (GO:0005515)synapse assembly (GO:0007416)synapse assembly (GO:0007416)transmembrane signaling receptor activity (GO:0004888)
Expression (TPM)
ADGRL3 — as a Regulated Gene

TFs regulating ADGRL3 0 TFs

Transcription factors with Perturb-seq knockdown data for ADGRL3. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = ADGRL3 upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.

Data: Effect:
TF Mean coef Binding Outlier TF→Gene link

Elements linked to ADGRL3

Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of ADGRL3, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.

Accessibility Element Dist. to TSS Link type TFs
chr4:61,199,868–61,203,663 21 bp At TSS Multiome 518
chr4:61,204,437–61,204,843 4.1 kb Proximal (<10kb) 119
chr4:61,210,219–61,210,823 9.9 kb Proximal (<10kb) 158
chr4:61,386,962–61,387,709 187.1 kb Distal (>10kb) Multiome 152

Genome Browser

Genomic view of the ADGRL3 locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.

chr4:61,189,868 – 61,397,709
Proximal 1 kb Distal 10 kb Multiome HiCAR ATAC-seq RNA-seq