Linked Genes

2 genes

Gene	Expression	Dist. to TSS	Distance	Link type
TRAPPC8		8.7 kb	Proximal	Proximity
ENSG00000263823		9.2 kb	Proximal	Proximity

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

7 transcription factors

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 287 bp overlap

ChIP DE DE-FOXA2-2 287 bp overlap

GATA4 2 datasets

ChIP DE DE-GATA4-1 252 bp overlap

ChIP DE DE-GATA4-2 287 bp overlap

GATA6 4 datasets

ChIP DE DE-GATA6-1 287 bp overlap

ChIP DE DE-GATA6-2 272 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 229 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 212 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 212 bp overlap

SMAD2_3 3 datasets

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 222 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 213 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 190 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 226 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 287 bp overlap