chr1 : 247,105,540 247,105,779
239 bp 9 TFs 3 linked genes
This 239 bp open chromatin element is linked to ENSG00000286747, ZNF669, and LINC02897 and is bound by 9 transcription factors.
Linked Genes
3 genes
Distance
Gene Expression Dist. to TSS Distance Link type
ENSG00000286747 135 bp At TSS Proximity
ZNF669 1.2 kb Proximal Proximity
LINC02897 6.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:247,100,540 – 247,110,779
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
9 transcription factors
Source
Cell type
ESR1 1 dataset
ChIP MCF-7_800 GSE115607.ESR1.MCF-7_800 75 bp overlap
EZH2 1 dataset
ChIP neural progenitor cell ENCFF018MKA 119 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 239 bp overlap
RARA 1 dataset
ChIP hiPSC_D2 GSE132532.RARA.hiPSC_D2 68 bp overlap
RFX1 2 datasets
ChIP K-562 ENCSR968GIB.RFX1.K-562 50 bp overlap
ChIP K-562 ENCSR041AXL.RFX1.K-562 54 bp overlap
SIN3A 1 dataset
ChIP H1 ENCFF042ZSL 63 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 203 bp overlap