chr15 : 38,248,467 38,248,912
445 bp 9 TFs 1 linked gene
This 445 bp open chromatin element is linked to SPRED1 and is bound by 9 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
SPRED1 3.9 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr15:38,243,467 – 38,253,912
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
9 transcription factors
Source
Cell type
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 277 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 445 bp overlap
ChIP DE DE-FOXA2-2 426 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 445 bp overlap
ChIP DE DE-GATA4-2 445 bp overlap
ChIP foregut GSE117136.GATA4.foregut 445 bp overlap
GATA6 5 datasets
ChIP DE DE-GATA6-1 445 bp overlap
ChIP DE DE-GATA6-2 445 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 445 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 422 bp overlap
ChIP foregut GSE117136.GATA6.foregut 445 bp overlap
HNF1B 1 dataset
ChIP foregut GSE117136.HNF1B.foregut 384 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 445 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 336 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 406 bp overlap
SS18 1 dataset
ChIP Aska-SS_BAF47KO1 GSE108025.SS18.Aska-SS_BAF47KO1 144 bp overlap