chr15 : 25,553,860 25,554,263
403 bp 9 TFs 0 linked genes
This 403 bp open chromatin element has no linked target genes and is bound by 9 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr15:25,548,860 – 25,559,263
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
9 transcription factors
Source
Cell type
Cebpa 1 dataset
ChIP BLaER1 ENCFF335XTP 316 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 403 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 370 bp overlap
ChIP DE DE-FOXA2-2 298 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 403 bp overlap
ChIP DE DE-GATA4-2 403 bp overlap
GATA6 4 datasets
ChIP DE DE-GATA6-1 389 bp overlap
ChIP DE DE-GATA6-2 403 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 271 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 291 bp overlap
PHF19 1 dataset
ChIP DU145_SH4 GSE135623.PHF19.DU145_SH4 161 bp overlap
POU5F1 1 dataset
ChIP SKM-1 GSE93706.POU5F1.SKM-1 173 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 403 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 129 bp overlap
SMAD2_3 2 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 193 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 403 bp overlap