chr11 : 30,026,788 30,027,116
328 bp 4 TFs 1 linked gene
This 328 bp open chromatin element is linked to KCNA4 and is bound by CTCF, EZH2, EZH2_phosphoT487, and RNF2.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
KCNA4 9.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:30,021,788 – 30,032,116
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
4 transcription factors
Source
Cell type
CTCF 22 datasets
ChIP C4-2B ENCFF821XVN 328 bp overlap
ChIP C4-2B ENCFF821XVN 190 bp overlap
ChIP GM04648 GSE148179.CTCF.GM04648 170 bp overlap
ChIP GM23338 ENCFF531QOI 278 bp overlap
ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 187 bp overlap
ChIP HEC-1-B_F-mutation GSE140868.CTCF.HEC-1-B_F-mutation 59 bp overlap
ChIP HEC-1-B_R1-mutation GSE140868.CTCF.HEC-1-B_R1-mutation 84 bp overlap
ChIP HEC-1-B_WT GSE140868.CTCF.HEC-1-B_WT 169 bp overlap
ChIP HL-60 GSE131577.CTCF.HL-60 85 bp overlap
ChIP HeLa-S3_shCtrl GSE137848.CTCF.HeLa-S3_shCtrl 168 bp overlap
ChIP LNCaP-C4-2B ENCSR460LGH.CTCF.LNCaP-C4-2B 208 bp overlap
ChIP LNCaP_Ctrl GSE125639.CTCF.LNCaP_Ctrl 117 bp overlap
ChIP SK-N-SH ENCSR541AMF.CTCF.SK-N-SH 178 bp overlap
ChIP endodermal cell ENCFF471YCZ 152 bp overlap
ChIP heart ENCSR565HBN.CTCF.heart 191 bp overlap
ChIP heart ENCSR778ZPK.CTCF.heart 190 bp overlap
ChIP heart ENCSR355PMV.CTCF.heart 167 bp overlap
ChIP heart right ventricle ENCFF163IJK 270 bp overlap
ChIP heart_left-ventricle ENCSR544APK.CTCF.heart_left-ventricle 229 bp overlap
ChIP left ventricle myocardium inferior ENCFF161DPW 318 bp overlap
ChIP testis ENCSR753RME.CTCF.testis 181 bp overlap
ChIP type B pancreatic cell ENCFF910FNQ 269 bp overlap
EZH2 1 dataset
ChIP GM23338 ENCSR045YHA.EZH2.GM23338 79 bp overlap
RNF2 3 datasets
ChIP H1 ENCFF239FFS 143 bp overlap
ChIP WA01 ENCSR784VUY.RNF2.WA01 171 bp overlap
ChIP WA09 GSE105028.RNF2.WA09 212 bp overlap