chr9 : 109,788,858 109,789,264
406 bp 4 TFs 1 linked gene
This 406 bp open chromatin element is linked to PALM2AKAP2 and is bound by CTCF, GATA4, GATA6, and MED26.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
PALM2AKAP2 8.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr9:109,783,858 – 109,794,264
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
4 transcription factors
Source
Cell type
CTCF 2 datasets
ChIP HEK293T GSE115862.CTCF.HEK293T 96 bp overlap
ChIP hepatocyte ERP000395.CTCF.hepatocyte 137 bp overlap
GATA4 6 datasets
ChIP DE DE-GATA4-1 269 bp overlap
ChIP DE DE-GATA4-2 347 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 254 bp overlap
ChIP foregut GSE117136.GATA4.foregut 383 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 406 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 406 bp overlap
GATA6 12 datasets
ChIP DE DE-GATA6-1 391 bp overlap
ChIP DE DE-GATA6-2 303 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 365 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 406 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 363 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 406 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 406 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 378 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 294 bp overlap
ChIP foregut GSE117136.GATA6.foregut 406 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 406 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 296 bp overlap
MED26 1 dataset
ChIP HEK293T GSE121024.MED26.HEK293T 91 bp overlap