chr8 : 8,392,135 8,392,437
302 bp 5 TFs 1 linked gene
This 302 bp open chromatin element is linked to PRAG1 and is bound by GATA4, GATA6, SMAD2-3, SMAD2_3, and SMARCC1.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
PRAG1 5.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr8:8,387,135 – 8,397,437
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
5 transcription factors
Source
Cell type
GATA4 3 datasets
ChIP DE DE-GATA4-1 58 bp overlap
ChIP DE DE-GATA4-2 220 bp overlap
ChIP foregut GSE117136.GATA4.foregut 104 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 165 bp overlap
ChIP DE DE-GATA6-2 168 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 302 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 280 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 136 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 302 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 121 bp overlap
ChIP foregut GSE117136.GATA6.foregut 53 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 100 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 171 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 105 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 93 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 129 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 105 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 118 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 256 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 218 bp overlap