chr6 : 104,934,253 104,934,406
153 bp 4 TFs 2 linked genes
This 153 bp open chromatin element is linked to LIN28B-AS1 and ENSG00000290011 and is bound by FOXA2, GATA4, GATA6, and NCOR2.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
LIN28B-AS1 6.1 kb Proximal Proximity
ENSG00000290011 7.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:104,929,253 – 104,939,406
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
4 transcription factors
Source
Cell type
FOXA2 3 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 153 bp overlap
ChIP DE DE-FOXA2-1 153 bp overlap
ChIP DE DE-FOXA2-2 132 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 153 bp overlap
ChIP DE DE-GATA4-2 153 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 153 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 153 bp overlap
ChIP DE DE-GATA6-2 153 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 153 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 153 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 153 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 153 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 153 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 153 bp overlap
NCOR2 1 dataset
ChIP LS180_125 GSE39277.NCOR2.LS180_125 94 bp overlap