chr5 : 88,701,827 88,702,012
185 bp 7 TFs 2 linked genes
This 185 bp open chromatin element is linked to GSCAR and ENSG00000250555 and is bound by 7 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
GSCAR 7.9 kb Proximal Proximity
ENSG00000250555 9.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:88,696,827 – 88,707,012
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
7 transcription factors
Source
Cell type
ESR1 1 dataset
ChIP Ishikawa ENCSR000BQR.ESR1.Ishikawa 151 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-1 185 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 170 bp overlap
NKX2-1 1 dataset
ChIP NCI-H3122 GSE39998.NKX2-1.NCI-H3122 150 bp overlap
NUTM1 1 dataset
ChIP embryonic-kidney_induced GSE133122.NUTM1.embryonic-kidney_induced 166 bp overlap
ZNF506 1 dataset
ChIP HEK293T GSE78099.ZNF506.HEK293T 121 bp overlap