chr5 : 7,853,039 7,853,325
286 bp 5 TFs 1 linked gene
This 286 bp open chromatin element is linked to CFAP90 and is bound by EOMES, FOXA1, GATA1, GATA4, and GATA6.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
CFAP90 1.9 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:7,848,039 – 7,858,325
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
5 transcription factors
Source
Cell type
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 135 bp overlap
FOXA1 1 dataset
ChIP primary-breast-cancer_B1_DSG GSE114737.FOXA1.primary-breast-cancer_B1_DSG 94 bp overlap
GATA1 1 dataset
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 60 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 286 bp overlap
ChIP DE DE-GATA4-2 286 bp overlap
ChIP foregut GSE117136.GATA4.foregut 236 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 286 bp overlap
ChIP DE DE-GATA6-2 286 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 245 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 286 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 286 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 197 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 198 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 232 bp overlap
ChIP foregut GSE117136.GATA6.foregut 216 bp overlap