chr1 : 84,501,882 84,502,014
132 bp 11 TFs 2 linked genes
This 132 bp open chromatin element is linked to GNG5 and SPATA1 and is bound by 11 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
GNG5 4.3 kb Proximal Proximity
SPATA1 4.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:84,496,882 – 84,507,014
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
11 transcription factors
Source
Cell type
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 132 bp overlap
NEUROD1 2 datasets
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 132 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 123 bp overlap
NEUROG2 4 datasets
ChIP MRC-5_NFD_02DPT GSE75910.NEUROG2.MRC-5_NFD_02DPT 132 bp overlap
ChIP MRC-5_NFD_05DPT GSE75910.NEUROG2.MRC-5_NFD_05DPT 132 bp overlap
ChIP MRC-5_NFD_1DPT GSE75910.NEUROG2.MRC-5_NFD_1DPT 129 bp overlap
ChIP MRC-5_N_05DPT GSE75910.NEUROG2.MRC-5_N_05DPT 132 bp overlap
NKX2-1 1 dataset
ChIP H9_derived-cIN GSE99937.NKX2-1.H9_derived-cIN 59 bp overlap
POU5F1 3 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 132 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 132 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 132 bp overlap
PRDM4 1 dataset
ChIP HEK293 ENCFF069PHD 132 bp overlap
SMARCB1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 100 bp overlap
SP1 1 dataset
ChIP H1 ENCFF263FUH 132 bp overlap
SPI1 1 dataset
ChIP EM-3 GSE128834.SPI1.EM-3 89 bp overlap
TCF4 1 dataset
ChIP GEN2-2 GSE76147.TCF4.GEN2-2 95 bp overlap
ZNF664 1 dataset
ChIP HEK293 ENCFF343XSW 62 bp overlap