chr4 : 154,623,220 154,623,400
180 bp 8 TFs 1 linked gene
This 180 bp open chromatin element is linked to LRAT and is bound by 8 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
LRAT 3.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:154,618,220 – 154,628,400
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
8 transcription factors
Source
Cell type
CTCF 21 datasets
ChIP C4-2B ENCFF821XVN 52 bp overlap
ChIP HCT-116 GSE131606.CTCF.HCT-116 62 bp overlap
ChIP LNCaP-C4-2B ENCSR460LGH.CTCF.LNCaP-C4-2B 131 bp overlap
ChIP MCF-10A GSE98551.CTCF.MCF-10A 85 bp overlap
ChIP RWPE1 ENCFF200GQF 176 bp overlap
ChIP SU-DHL-6 ENCFF116KKR 124 bp overlap
ChIP T-47D_D538G GSE148277.CTCF.T-47D_D538G 180 bp overlap
ChIP activated CD4-positive, alpha-beta T cell ENCFF095PZX 150 bp overlap
ChIP body of pancreas ENCFF756FGB 64 bp overlap
ChIP brain ENCFF099ASU 84 bp overlap
ChIP chondrocyte ENCFF134ORZ 55 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF677SUG 78 bp overlap
ChIP endothelial cell ENCFF663LIE 114 bp overlap
ChIP hESC_D15 GSE116862.CTCF.hESC_D15 180 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 97 bp overlap
ChIP hESC_D7 GSE116862.CTCF.hESC_D7 52 bp overlap
ChIP mesothelial cell of epicardium ENCFF427RFE 134 bp overlap
ChIP natural killer cell ENCFF517SNI 170 bp overlap
ChIP primary-glioblastoma_G583 GSE121601.CTCF.primary-glioblastoma_G583 84 bp overlap
ChIP spleen ENCFF326DUY 94 bp overlap
ChIP spleen ENCFF653ONC 130 bp overlap
FOXA1 1 dataset
ChIP HEK293_r261g_TFS GSE123618.FOXA1.HEK293_r261g_TFS 75 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-1 85 bp overlap
GATA4 1 dataset
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 180 bp overlap
GATA6 1 dataset
ChIP DE_D2 S55-DE-d2-GATA6-exp2 105 bp overlap
KDM1A 1 dataset
ChIP K562 ENCFF133OLU 76 bp overlap
RAD21 1 dataset
ChIP SLK_Ctrl GSE138105.RAD21.SLK_Ctrl 55 bp overlap
ZNF766 1 dataset
ChIP K562 ENCFF348LDO 125 bp overlap