chr4 : 110,792,455 – 110,792,844
389 bp 13 TFs 1 linked gene
This 389 bp open chromatin element is linked to LINC01438 and is bound by 13 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
LINC01438 1.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:110,787,455 – 110,797,844
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
13 transcription factors
Source
Cell type
CHD7 1 dataset
ChIP H1 ENCFF126NLU 125 bp overlap
ESR1 1 dataset
ChIP ZR751 ERP000783.ESR1.ZR751 160 bp overlap
FOXA1 9 datasets
ChIP ZR-75-1_vehicle_ab1 GSE112969.FOXA1.ZR-75-1_vehicle_ab1 234 bp overlap
ChIP ZR-75-1_vehicle_ab2 GSE112969.FOXA1.ZR-75-1_vehicle_ab2 322 bp overlap
ChIP ZR751 GSE72249.FOXA1.ZR751 246 bp overlap
ChIP ZR751_DEX GSE72249.FOXA1.ZR751_DEX 236 bp overlap
ChIP ZR751_E2 GSE72249.FOXA1.ZR751_E2 225 bp overlap
ChIP ZR751_E2_TAM ERP000380.FOXA1.ZR751_E2_TAM 168 bp overlap
ChIP breast-cancer_Veh-2856 GSE128018.FOXA1.breast-cancer_Veh-2856 389 bp overlap
ChIP breast-cancer_Veh-2858 GSE128018.FOXA1.breast-cancer_Veh-2858 377 bp overlap
ChIP breast-cancer_Veh-2860 GSE128018.FOXA1.breast-cancer_Veh-2860 327 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 389 bp overlap
ChIP DE DE-FOXA2-2 389 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 389 bp overlap
ChIP DE DE-GATA4-2 389 bp overlap
GATA6 3 datasets
ChIP DE DE-GATA6-1 389 bp overlap
ChIP DE DE-GATA6-2 389 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 298 bp overlap
NUTM1 1 dataset
ChIP embryonic-kidney_induced GSE133122.NUTM1.embryonic-kidney_induced 135 bp overlap
PSIP1 1 dataset
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 100 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 89 bp overlap
SMARCA4 2 datasets
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 219 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 388 bp overlap
SMARCC1 2 datasets
ChIP HS-SY-2 GSE108025.SMARCC1.HS-SY-2 389 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 294 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 363 bp overlap
ZBTB24 1 dataset
ChIP HCT-116 GSE111683.ZBTB24.HCT-116 200 bp overlap
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