chr4 : 55,160,446 55,160,736
290 bp 9 TFs 1 linked gene
This 290 bp open chromatin element is linked to ENSG00000287060 and is bound by 9 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
ENSG00000287060 2.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:55,155,446 – 55,165,736
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
9 transcription factors
Source
Cell type
CEBPA 1 dataset
ChIP Kasumi-1_CEBPA-ER GSE102697.CEBPA.Kasumi-1_CEBPA-ER 63 bp overlap
ERG 1 dataset
ChIP aortic-endothelial-cell_D24 GSE139377.ERG.aortic-endothelial-cell_D24 83 bp overlap
FOS 1 dataset
ChIP endothelial cell of umbilical vein ENCFF415XBG 53 bp overlap
GATA6 6 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 287 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 272 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 290 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 249 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 290 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 290 bp overlap
HMGB2 1 dataset
ChIP HUVEC-C GSE98245.HMGB2.HUVEC-C 221 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 269 bp overlap
SMAD2_3 2 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 254 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 160 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 290 bp overlap
SPI1 7 datasets
ChIP CD34_FETAL GSE70660.SPI1.CD34_FETAL 70 bp overlap
ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 156 bp overlap
ChIP HL-60 ENCFF645GBT 171 bp overlap
ChIP K-562 GSE70482.SPI1.K-562 74 bp overlap
ChIP Kasumi-1_SICTR GSE60130.SPI1.Kasumi-1_SICTR 133 bp overlap
ChIP Kasumi-1_SIRUNX1ETO GSE60130.SPI1.Kasumi-1_SIRUNX1ETO 130 bp overlap
ChIP U-937 GSE128834.SPI1.U-937 63 bp overlap