Linked Genes

1 gene

Gene	Expression	Dist. to TSS	Distance	Link type
NEGR1-IT1		8.4 kb	Proximal	Proximity

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

7 transcription factors

BRD4 1 dataset

ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 258 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 524 bp overlap

ChIP DE DE-FOXA2-2 409 bp overlap

GATA4 2 datasets

ChIP DE DE-GATA4-1 461 bp overlap

ChIP DE DE-GATA4-2 344 bp overlap

GATA6 2 datasets

ChIP DE DE-GATA6-1 390 bp overlap

ChIP DE DE-GATA6-2 416 bp overlap

HMGA1 1 dataset

ChIP IMR-90_ctrl GSE111841.HMGA1.IMR-90_ctrl 107 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 249 bp overlap

T 1 dataset

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 180 bp overlap