chr3 : 188,149,671 188,149,914
243 bp 10 TFs 2 linked genes
This 243 bp open chromatin element is linked to LPP and LPP-AS2 and is bound by 10 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
LPP 3.4 kb Proximal Proximity
LPP-AS2 4.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:188,144,671 – 188,154,914
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
10 transcription factors
Source
Cell type
EBF1 1 dataset
ChIP MUTUL GSE75503.EBF1.MUTUL 208 bp overlap
FOXA1 1 dataset
ChIP breast-cancer_Veh-2860 GSE128018.FOXA1.breast-cancer_Veh-2860 181 bp overlap
FOXA2 3 datasets
ChIP Caco-2 GSE66218.FOXA2.Caco-2 97 bp overlap
ChIP DE DE-FOXA2-1 243 bp overlap
ChIP DE DE-FOXA2-2 243 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 243 bp overlap
ChIP DE DE-GATA4-2 243 bp overlap
ChIP foregut GSE117136.GATA4.foregut 243 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 243 bp overlap
GATA6 10 datasets
ChIP DE DE-GATA6-1 243 bp overlap
ChIP DE DE-GATA6-2 243 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 243 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 190 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 243 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 202 bp overlap
ChIP foregut GSE117136.GATA6.foregut 242 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 219 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 243 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 205 bp overlap
IKZF1 1 dataset
ChIP K-562 ENCSR395HWC.IKZF1.K-562 187 bp overlap
KDM1A 1 dataset
ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 233 bp overlap
KLF17 1 dataset
ChIP HEK293 ENCSR065WUF.KLF17.HEK293 195 bp overlap
SMAD2-3 1 dataset
ChIP HUVEC-C_TGFB1 GSE134556.SMAD2-3.HUVEC-C_TGFB1 243 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 183 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 136 bp overlap