chr3 : 182,003,380 182,003,633
253 bp 6 TFs 1 linked gene
This 253 bp open chromatin element is linked to LINC01206 and is bound by 6 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
LINC01206 2.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:181,998,380 – 182,008,633
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
6 transcription factors
Source
Cell type
GATA6 4 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 252 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 253 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 253 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 253 bp overlap
MYC 1 dataset
ChIP U2OS_Doxy GSE44672.MYC.U2OS_Doxy 89 bp overlap
PGR 2 datasets
ChIP T-47D_R5020 GSE68355.PGR.T-47D_R5020 65 bp overlap
ChIP T-47D_R5020-A1 GSE126859.PGR.T-47D_R5020-A1 83 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 253 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 253 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 253 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 253 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 253 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 231 bp overlap