chr3 : 146,411,491 146,412,037
546 bp 7 TFs 2 linked genes
This 546 bp open chromatin element is linked to ENSG00000241358 and ENSG00000293191 and is bound by 7 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
ENSG00000241358 4.5 kb Proximal Proximity
ENSG00000293191 4.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:146,406,491 – 146,417,037
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
7 transcription factors
Source
Cell type
BRD3 1 dataset
ChIP H-1_DE GSE126661.BRD3.H-1_DE 128 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 477 bp overlap
ChIP DE DE-FOXA2-2 489 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 316 bp overlap
ChIP DE DE-GATA4-2 490 bp overlap
GATA6 7 datasets
ChIP DE DE-GATA6-1 344 bp overlap
ChIP DE DE-GATA6-2 417 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 305 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 322 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 366 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 429 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 98 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 546 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 253 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 405 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 385 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 471 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 546 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 389 bp overlap