chr3 : 107,233,444 107,233,620
176 bp 3 TFs 2 linked genes
This 176 bp open chromatin element is linked to LINC00882 and DUBR and is bound by HNF4A, POU5F1_M, and SOX17_M.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
LINC00882 7.0 kb Proximal Proximity
DUBR 7.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:107,228,444 – 107,238,620
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
3 transcription factors
Source
Cell type
HNF4A 1 dataset
ChIP gastric-epithelial-cell_OE GSE114018.HNF4A.gastric-epithelial-cell_OE 52 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 176 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 176 bp overlap