chr3 : 98,191,084 98,191,325
241 bp 4 TFs 1 linked gene
This 241 bp open chromatin element is linked to ENSG00000289078 and is bound by GATA6, JUN, SMAD2-3, and SMAD2_3.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
ENSG00000289078 33 bp At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:98,186,084 – 98,196,325
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
4 transcription factors
Source
Cell type
GATA6 3 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 241 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 198 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 241 bp overlap
JUN 6 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 241 bp overlap
ChIP DE_D1 S13-DE-d1-JUN-exp1 210 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 241 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 241 bp overlap
ChIP DE_D2 S54-DE-d2-JUN-exp2 241 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 238 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 231 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 241 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 191 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 241 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 181 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 216 bp overlap