chr3 : 69,730,564 69,730,893
329 bp 12 TFs 1 linked gene
This 329 bp open chromatin element is linked to MITF and is bound by 12 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
MITF 8.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:69,725,564 – 69,735,893
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
12 transcription factors
Source
Cell type
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 207 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 240 bp overlap
ChIP DE DE-FOXA2-2 164 bp overlap
GABPA 1 dataset
ChIP VCaP_ETOH GSE49091.GABPA.VCaP_ETOH 151 bp overlap
GATA1 1 dataset
ChIP K-562 GSE107726.GATA1.K-562 172 bp overlap
GATA4 6 datasets
ChIP DE DE-GATA4-1 329 bp overlap
ChIP DE DE-GATA4-2 329 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 235 bp overlap
ChIP foregut GSE117136.GATA4.foregut 322 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 251 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 323 bp overlap
GATA6 13 datasets
ChIP DE DE-GATA6-1 329 bp overlap
ChIP DE DE-GATA6-2 329 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 207 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 121 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 329 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 236 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 207 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 281 bp overlap
ChIP foregut GSE117136.GATA6.foregut 260 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 282 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 217 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 200 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 281 bp overlap
KDM1A 2 datasets
ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 81 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 127 bp overlap
NKX2-5 2 datasets
ChIP hESC_ab3584 GSE89457.NKX2-5.hESC_ab3584 244 bp overlap
ChIP hESC_sc-14033 GSE89457.NKX2-5.hESC_sc-14033 206 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 186 bp overlap
TBX5 2 datasets
ChIP G296S GSE85628.TBX5.G296S 188 bp overlap
ChIP G296S_2 GSE85628.TBX5.G296S_2 188 bp overlap