chr3 : 45,756,823 45,757,497
674 bp 7 TFs 6 linked genes
This 674 bp open chromatin element is linked to 6 target genes and is bound by 7 transcription factors.
Linked Genes
6 genes
Gene Expression Dist. to TSS Distance Link type
SLC6A20 39.1 kb Distal Multiome
SACM1L 68.1 kb Distal Multiome
LIMD1-AS1 68.2 kb Distal Multiome
LZTFL1 84.7 kb Distal Multiome
LIMD1 163.0 kb Distal Multiome
FYCO1 238.5 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:45,751,823 – 45,762,497
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
7 transcription factors
Source
Cell type
Cebpa 1 dataset
ChIP BLaER1 ENCFF031ISE 415 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 446 bp overlap
ChIP DE DE-GATA4-2 645 bp overlap
GATA6 4 datasets
ChIP DE DE-GATA6-1 440 bp overlap
ChIP DE DE-GATA6-2 674 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 365 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 674 bp overlap
SCRT2 1 dataset
ChIP HEK293 ENCFF711QQB 377 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 395 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 412 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 269 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 644 bp overlap