chr3 : 45,380,040 – 45,380,396
356 bp 6 TFs 1 linked gene
This 356 bp open chromatin element is linked to LARS2 and is bound by 6 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
LARS2 8.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:45,375,040 – 45,385,396
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
6 transcription factors
Source
Cell type
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 356 bp overlap
ChIP DE DE-FOXA2-2 356 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 356 bp overlap
ChIP DE DE-GATA4-2 356 bp overlap
GATA6 3 datasets
ChIP DE DE-GATA6-1 356 bp overlap
ChIP DE DE-GATA6-2 356 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 356 bp overlap
SMAD2_3 1 dataset
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 286 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 153 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 344 bp overlap
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