chr3 : 13,949,164 13,949,411
247 bp 8 TFs 0 linked genes
This 247 bp open chromatin element has no linked target genes and is bound by 8 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:13,944,164 – 13,954,411
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
8 transcription factors
Source
Cell type
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 124 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 247 bp overlap
ChIP DE DE-FOXA2-2 247 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 228 bp overlap
ChIP DE DE-GATA4-2 247 bp overlap
GATA6 7 datasets
ChIP DE DE-GATA6-1 247 bp overlap
ChIP DE DE-GATA6-2 247 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 247 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 247 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 247 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 247 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 247 bp overlap
NEUROD1 2 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 184 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 170 bp overlap
RXR 1 dataset
ChIP LS180 GSE31939.RXR.LS180 109 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 247 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 207 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 200 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 247 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 67 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 212 bp overlap