chr3 : 3,319,381 3,319,619
238 bp 5 TFs 0 linked genes
This 238 bp open chromatin element has no linked target genes and is bound by DUX4, GATA6, JUN, SIX2, and SMAD2_3.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:3,314,381 – 3,324,619
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
5 transcription factors
Source
Cell type
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 140 bp overlap
GATA6 1 dataset
ChIP DE_D2 S55-DE-d2-GATA6-exp2 238 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 206 bp overlap
SIX2 2 datasets
ChIP HEK GSE73865.SIX2.HEK 184 bp overlap
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 162 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 238 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 110 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 238 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 238 bp overlap