chr1 : 5,515,829 5,516,307
478 bp 13 TFs 0 linked genes
This 478 bp open chromatin element has no linked target genes and is bound by 13 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:5,510,829 – 5,521,307
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
13 transcription factors
Source
Cell type
Cebpa 2 datasets
ChIP BLaER1 ENCFF364PUR 98 bp overlap
ChIP BLaER1 ENCFF460KDD 401 bp overlap
ESR1 1 dataset
ChIP MDA-MB-134-VI_ESTROGEN GSE51022.ESR1.MDA-MB-134-VI_ESTROGEN 60 bp overlap
FOXA1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 302 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 478 bp overlap
ChIP DE DE-FOXA2-2 478 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 478 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 478 bp overlap
ChIP DE DE-GATA4-2 478 bp overlap
ChIP foregut GSE117136.GATA4.foregut 478 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 478 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 478 bp overlap
GATA6 7 datasets
ChIP DE DE-GATA6-1 478 bp overlap
ChIP DE DE-GATA6-2 478 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 259 bp overlap
ChIP foregut GSE117136.GATA6.foregut 478 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 478 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 400 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 384 bp overlap
KDM1A 3 datasets
ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 478 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 478 bp overlap
ChIP pancreatic-progenitor_PP2-KDM1A-inh GSE104840.KDM1A.pancreatic-progenitor_PP2-KDM1A-inh 449 bp overlap
MED26 1 dataset
ChIP HEK293T GSE121024.MED26.HEK293T 174 bp overlap
MITF 1 dataset
ChIP melanocyte_BRAFV600E GSE50681.MITF.melanocyte_BRAFV600E 210 bp overlap
PDX1 2 datasets
ChIP hiPSC GSE125768.PDX1.hiPSC 381 bp overlap
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 411 bp overlap
RXR 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.RXR.pancreatic-progenitor_PP1 246 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 364 bp overlap
SOX11 1 dataset
ChIP GRANT-A519 GSE52146.SOX11.GRANT-A519 126 bp overlap