chr2 : 38,999,681 39,000,063
382 bp 10 TFs 1 linked gene
This 382 bp open chromatin element is linked to SOS1-IT1 and is bound by 10 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
SOS1-IT1 5.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:38,994,681 – 39,005,063
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
10 transcription factors
Source
Cell type
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 290 bp overlap
ERG 1 dataset
ChIP aortic-endothelial-cell_D1 GSE139377.ERG.aortic-endothelial-cell_D1 123 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 382 bp overlap
ChIP DE DE-FOXA2-2 382 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 382 bp overlap
ChIP DE DE-GATA4-2 382 bp overlap
ChIP foregut GSE117136.GATA4.foregut 382 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 377 bp overlap
GATA6 6 datasets
ChIP DE DE-GATA6-1 382 bp overlap
ChIP DE DE-GATA6-2 382 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 350 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 347 bp overlap
ChIP foregut GSE117136.GATA6.foregut 382 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 269 bp overlap
NEUROD1 1 dataset
ChIP D283-Med GSE92582.NEUROD1.D283-Med 286 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 382 bp overlap
SMARCA4 3 datasets
ChIP 501-mel_SHCTR GSE61965.SMARCA4.501-mel_SHCTR 382 bp overlap
ChIP 501-mel_SHMITF GSE61965.SMARCA4.501-mel_SHMITF 301 bp overlap
ChIP 501-mel_SHSOX10 GSE61965.SMARCA4.501-mel_SHSOX10 200 bp overlap
SNAI2 1 dataset
ChIP SMS-CTR_D48 GSE137168.SNAI2.SMS-CTR_D48 103 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 249 bp overlap