DE-3

DE-3.27

Submodule 14 genes

Secretory pathway and calcium signaling components

This module contains 14 genes including RELN, ITPR1, PCSK2, and ARB2A, with enrichment in secretory pathway, calcium signaling, and vesicular transport processes. Knockdown of FOXH1, SMAD4, and SOX17 represses this module, indicating these transcription factors are required for its expression during endoderm differentiation.


TF Regulatory Network

Direction indicates the effect of TF knockdown on this submodule (↑ = KD upregulates; ↓ = KD downregulates).

Evidence: Direction: Max binding-only shown:
Perturbation + Binding
Perturbation only
Binding only
TF Dir NES #gRNA padj Bind OR

Enriched Terms

GO terms and pathway annotations enriched in this gene set (g:Profiler).


Module Genes (13)

All genes assigned to this co-expression submodule.

Gene Type Publications

Local co-expression graph for member genes built from Hotspot z-scores. Adjust the z-score threshold and repulsion sliders to explore the neighbourhood.

Gene Co-expression Network

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Low
High z