Transcription factors with Perturb-seq knockdown data for ZNF451-AS1. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = ZNF451-AS1 upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.
| TF | Mean coef | Binding | Outlier | TF→Gene link |
|---|
Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of ZNF451-AS1, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.
| Accessibility | Element | Dist. to TSS | Link type | TFs |
|---|---|---|---|---|
| chr6:56,953,824–56,956,167 | 217.2 kb | Distal (>10kb) Multiome | 903 | |
| chr6:57,046,297–57,047,003 | 125.8 kb | Distal (>10kb) Multiome | 808 | |
| chr6:57,089,489–57,090,518 | 82.4 kb | Distal (>10kb) Multiome | 913 | |
| chr6:57,171,958–57,173,533 | 205 bp | At TSS Multiome | 1049 | |
| chr6:57,174,282–57,174,411 | 1.9 kb | Proximal (<10kb) | 183 | |
| chr6:57,221,224–57,222,970 | 49.3 kb | Distal (>10kb) Multiome | 867 | |
| chr6:57,316,348–57,318,082 | 145.2 kb | Distal (>10kb) Multiome HiCAR | 828 | |
| chr6:57,318,958–57,320,128 | 147.1 kb | Distal (>10kb) Multiome HiCAR | 130 | |
| chr6:57,423,340–57,424,320 | 251.3 kb | Distal (>10kb) Multiome | 233 |
Genomic view of the ZNF451-AS1 locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.