ZNF106
zinc finger protein 106 | SH3BP3, ZNF474, ZFP106

Enables RNA binding activity. Predicted to be involved in insulin receptor signaling pathway. Predicted to be located in nuclear speck and nucleolus. Predicted to be active in cytosol and membrane. [provided by Alliance of Genome Resources, Jul 2025]

Member of: DE-5
Biological processes 5 terms
Expression (TPM)
ZNF106 — as a Regulated Gene

TFs regulating ZNF106 0 TFs

Transcription factors with Perturb-seq knockdown data for ZNF106. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = ZNF106 upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.

Data: Effect:
TF Mean coef Binding Outlier TF→Gene link

Elements linked to ZNF106

Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of ZNF106, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.

Accessibility Element Dist. to TSS Link type TFs
chr15:42,273,010–42,273,873 217.7 kb Distal (>10kb) Multiome 883
chr15:42,457,473–42,457,710 at TSS At TSS 122
chr15:42,490,811–42,491,337 11 bp At TSS Multiome 807
chr15:42,495,454–42,495,753 4.3 kb Proximal (<10kb) 581
chr15:42,548,416–42,549,113 57.6 kb Distal (>10kb) Multiome 848
chr15:42,575,082–42,575,846 84.3 kb Distal (>10kb) Multiome 785
chr15:42,736,813–42,737,498 246.1 kb Distal (>10kb) Multiome 576

Genome Browser

Genomic view of the ZNF106 locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.

chr15:42,263,010 – 42,747,498
Proximal 1 kb Distal 10 kb Multiome HiCAR ATAC-seq RNA-seq