ZDHHC11
zDHHC palmitoyltransferase 11 | FLJ13153, ZNF399
ZDHHC11 — as a Regulated Gene

TFs regulating ZDHHC11 0 TFs

Transcription factors with Perturb-seq knockdown data for ZDHHC11. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = ZDHHC11 upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.

Data: Effect:
TF Mean coef Binding Outlier TF→Gene link

Elements linked to ZDHHC11

Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of ZDHHC11, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.

Accessibility Element Dist. to TSS Link type TFs
chr5:611,543–612,836 230.2 kb Distal (>10kb) Multiome 508
chr5:693,160–693,784 149.0 kb Distal (>10kb) Multiome 258
chr5:784,104–785,298 57.7 kb Distal (>10kb) Multiome 316
chr5:892,342–893,335 50.3 kb Distal (>10kb) Multiome 802
chr5:1,004,572–1,005,613 162.5 kb Distal (>10kb) Multiome 404
chr5:1,008,462–1,009,631 166.3 kb Distal (>10kb) Multiome 276
chr5:1,102,030–1,102,780 259.9 kb Distal (>10kb) Multiome 207
chr5:1,111,233–1,112,367 269.5 kb Distal (>10kb) Multiome 516

Genome Browser

Genomic view of the ZDHHC11 locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.

chr5:601,543 – 1,122,367
Proximal 1 kb Distal 10 kb Multiome HiCAR ATAC-seq RNA-seq